Transformation Gene & Genome

Protocol

1 reaction per group

  • 25 µL competent cells (get from Tom’s lab, or NEB C2988J)
  • 1 µL plasmid Klp61F (10-50 ng) (in plasmids box in 362A freezer) (2024)
  • 5 uL annealed plasmid (2025)
  • ice 5 minutes
  • heat shock 42C 30 sec
  • ice, bring volume to 1 mL with LB
  • shake (200 rpm) at 37C 20-30 min
  • Plate 200 µL on LB-Amp (carbenicillin)
  • Make a second plate:
    • Spin down remaining 800 µL,
    • Resuspend in 200 µL
    • plate on LB-Amp
  • incubate 37C overnight
  • instructors take plates and start liquid cultures from them for the students
    • (2024)
      • For each group, instructors take 3 colonies from transformation plates
      • Grow overnight in LB amp 5 mL aliquots (Thursday)
      • Pellet (Friday), remove supernate. Refrigerate pellet over weekend
      • Distribute pellets Plus miniprep reagents on Monday
    • (2025)
      • Instructors pick colonies

Students need

  • LB-Amp plates per group
  • 1 mL LB per group
  • sterile water
  • sterile beads
  • hot block at 42C
  • shaker at 37C, rigged with a slanted microfuge tube rack
  • (2024) plasmid Klp61F (do miniprep in advance if there is none in the plasmid box in 362A freezer
  • (2025) created plasmid
  • competent cells
  • markers

Day After (instructors)

  • Check plates
  • Pick colony
  • Grow up in liquid culture
  • Spin down
  • Save pellet for next class