| UMass week | Dates | Lab Topic | Lab Activities | Deliverables |
|---|---|---|---|---|
| Week 1 | 9/1-9/5 | NO LAB THIS WEEK | NONE | Syllabus quiz Intro survey UV mutagenesis quiz |
| Week 2 | 9/8-9/12 | Yeast observation & picking mutants | Observing wild type and mutant yeast Completing complementation activity Pipetting practice Choosing and subculturing new mutants for characterization | Prelab quiz |
| Week 3 | 9/15-9/19 | Observing subculture plates & scientific communication 1 DNA extraction | Observing subculture plates Assembling stripe plates for mating Dissecting a scientific introduction Outlining the introduction for your yeast manuscript DNA extraction from subcultures | Prelab quiz Lab notebook WRITE YOUR INTRODUCTION! |
| Week 4 | 9/22-9/26 | PCR & complementation testing | PCR amplification of mutant DNA extracts Complementation testing of mutants | Prelab quiz Lab notebook Introduction due (1/group) |
| Week 5 | 9/29-10/3 | Gel electrophoresis I, DNA sequencing I & complementation assay interpretation | Gel electrophoresis of week 4 PCRs Packaging successful PCRs for sequencing Interpreting complementation tests Replica plating of complementation tests | Prelab quiz Lab notebook |
| Week 6 | 10/6-10/10 | Yeast bioinformatics | Bioinformatic analysis of mutant sequences Interpretation of replica plates | Prelab quiz Lab notebook |
| Week 7 | 10/13-10/17 | NO LAB THIS WEEK | NONE | WRITE YOUR METHODS & RESULTS! |
| Week 8 | 10/20-10/24 | Dog DNA Extraction & PCR Amplification | DNA extraction from dog swabs Nanodrop spectrophotometry PCR amplification of DNA extracts | Prelab quizLab notebook Revised intro, methods & results due (1/group) WRITE YOUR ABSTRACT & DISCUSSION (1/student) |
| Week 9 | 10/27-10/31 | Gel electrophoresis II and DNA sequencing II | Gel electrophoresis of dog PCRs Package successful PCRs for sequencing | Prelab quiz Lab notebook Final yeast manuscript due (1/student) |
| Week 10 | 11/3-1//17 (MWTh ONLY) | RFLP & Dog bioinformatics I 2nd dog gel | Restriction digests RFLP analysis of TYRP1 Bioinformatic analysis of MC1R | Prelab quiz Lab notebook |
| Week 11 | 11/10-11/14 | NO LAB THIS WEEK | NONE | |
| Week 12 | 11/17-11/21 Tu ONLY | RFLP & Dog bioinformatics I 2nd dog gel | Restriction digests RFLP analysis of TYRP1 Bioinformatic analysis of MC1R | Prelab quiz Lab notebook |
| 11/17-11/21 MWTh ONLY | Dog bioinformatics II | Bioinformatic analysis of ASIP and BDef Final dog data analysis Work on presentations | Prelab quiz Lab notebook | |
| Week 13 | 11/24-11/28 Tu ONLY | Dog bioinformatics II | Bioinformatic analysis of ASIP and BDef Final dog data analysis Work on presentations | Prelab quiz Lab notebook |
| 11/24-11/28 MWTh ONLY | NO LAB THIS WEEK | NONE | PREP YOUR PRESENTATIONS! | |
| Week 14 | 12/1-12/5 | Presentation symposium | Present the results of your dog genotyping project | Oral presentations |
| Week 15 | 5/5-5/9 | NO LAB THIS WEEK | NONE | Presentation metacognition assignment Complete your university course evals for bonus points! |
| Finals week | Final exam | Final exam | Final exam |